Dataset Preview
Duplicate
The full dataset viewer is not available (click to read why). Only showing a preview of the rows.
The dataset generation failed
Error code:   DatasetGenerationError
Exception:    CastError
Message:      Couldn't cast
patient_id: string
status: string
reason: string
path_pre: string
path_post: string
same_series_pair: bool
pre_desc: string
post_desc: string
corr_global: double
shifts: list<item: int64>
  child 0, item: int64
meta_valid: bool
meta_issue: string
micro_cube_path: string
micro_cube_shape: list<item: int64>
  child 0, item: int64
orig_post_shape: list<item: int64>
  child 0, item: int64
roi_coords: list<item: int64>
  child 0, item: int64
c1_mean: double
c1_std: double
c1_min: double
c1_max: double
c2_mean: double
c2_std: double
c2_min: double
c2_max: double
c3_mean: double
c3_std: double
c3_min: double
c3_max: double
c4_mean: double
c4_std: double
c4_min: double
c4_max: double
timestamp: timestamp[s]
to
{'patient_id': Value('string'), 'status': Value('string'), 'reason': Value('string'), 'path_pre': Value('string'), 'path_post': Value('string'), 'same_series_pair': Value('bool'), 'pre_desc': Value('string'), 'post_desc': Value('string'), 'corr_global': Value('float64'), 'shifts': List(Value('int64')), 'meta_valid': Value('bool'), 'meta_issue': Value('string'), 'micro_cube_path': Value('string'), 'micro_cube_shape': List(Value('int64')), 'orig_post_shape': List(Value('int64')), 'roi_coords': List(Value('int64')), 'c1_mean': Value('float64'), 'c1_std': Value('float64'), 'c1_min': Value('float64'), 'c1_max': Value('float64'), 'c2_mean': Value('float64'), 'c2_std': Value('float64'), 'c2_min': Value('float64'), 'c2_max': Value('float64'), 'c3_mean': Value('float64'), 'c3_std': Value('float64'), 'c3_min': Value('float64'), 'c3_max': Value('float64'), 'timestamp': Value('timestamp[s]')}
because column names don't match
Traceback:    Traceback (most recent call last):
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1779, in _prepare_split_single
                  for key, table in generator:
                                    ^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/packaged_modules/json/json.py", line 295, in _generate_tables
                  self._cast_table(pa_table, json_field_paths=json_field_paths),
                  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/packaged_modules/json/json.py", line 128, in _cast_table
                  pa_table = table_cast(pa_table, self.info.features.arrow_schema)
                             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/table.py", line 2281, in table_cast
                  return cast_table_to_schema(table, schema)
                         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/table.py", line 2227, in cast_table_to_schema
                  raise CastError(
              datasets.table.CastError: Couldn't cast
              patient_id: string
              status: string
              reason: string
              path_pre: string
              path_post: string
              same_series_pair: bool
              pre_desc: string
              post_desc: string
              corr_global: double
              shifts: list<item: int64>
                child 0, item: int64
              meta_valid: bool
              meta_issue: string
              micro_cube_path: string
              micro_cube_shape: list<item: int64>
                child 0, item: int64
              orig_post_shape: list<item: int64>
                child 0, item: int64
              roi_coords: list<item: int64>
                child 0, item: int64
              c1_mean: double
              c1_std: double
              c1_min: double
              c1_max: double
              c2_mean: double
              c2_std: double
              c2_min: double
              c2_max: double
              c3_mean: double
              c3_std: double
              c3_min: double
              c3_max: double
              c4_mean: double
              c4_std: double
              c4_min: double
              c4_max: double
              timestamp: timestamp[s]
              to
              {'patient_id': Value('string'), 'status': Value('string'), 'reason': Value('string'), 'path_pre': Value('string'), 'path_post': Value('string'), 'same_series_pair': Value('bool'), 'pre_desc': Value('string'), 'post_desc': Value('string'), 'corr_global': Value('float64'), 'shifts': List(Value('int64')), 'meta_valid': Value('bool'), 'meta_issue': Value('string'), 'micro_cube_path': Value('string'), 'micro_cube_shape': List(Value('int64')), 'orig_post_shape': List(Value('int64')), 'roi_coords': List(Value('int64')), 'c1_mean': Value('float64'), 'c1_std': Value('float64'), 'c1_min': Value('float64'), 'c1_max': Value('float64'), 'c2_mean': Value('float64'), 'c2_std': Value('float64'), 'c2_min': Value('float64'), 'c2_max': Value('float64'), 'c3_mean': Value('float64'), 'c3_std': Value('float64'), 'c3_min': Value('float64'), 'c3_max': Value('float64'), 'timestamp': Value('timestamp[s]')}
              because column names don't match
              
              The above exception was the direct cause of the following exception:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1347, in compute_config_parquet_and_info_response
                  parquet_operations = convert_to_parquet(builder)
                                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 980, in convert_to_parquet
                  builder.download_and_prepare(
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 882, in download_and_prepare
                  self._download_and_prepare(
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 943, in _download_and_prepare
                  self._prepare_split(split_generator, **prepare_split_kwargs)
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1646, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                                               ^^^^^^^^^^^^^^^^^^^^^^^^^^^
                File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1832, in _prepare_split_single
                  raise DatasetGenerationError("An error occurred while generating the dataset") from e
              datasets.exceptions.DatasetGenerationError: An error occurred while generating the dataset

Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.

patient_id
string
status
string
reason
string
path_pre
string
path_post
string
same_series_pair
bool
pre_desc
string
post_desc
string
corr_global
float64
shifts
list
meta_valid
bool
meta_issue
string
micro_cube_path
string
micro_cube_shape
list
orig_post_shape
list
roi_coords
list
c1_mean
float64
c1_std
float64
c1_min
float64
c1_max
float64
c2_mean
float64
c2_std
float64
c2_min
float64
c2_max
float64
c3_mean
float64
c3_std
float64
c3_min
float64
c3_max
float64
timestamp
timestamp[s]
Breast_MRI_001
REVIEW
datasets/raw_data/Breast_MRI_001/01-01-1990-NA-MRI BREAST BILATERAL WWO-97538/14.000000-ax dyn 4th pass-47500
datasets/raw_data/Breast_MRI_001/01-01-1990-NA-MRI BREAST BILATERAL WWO-97538/14.000000-ax dyn 4th pass-47500
true
ax dyn 4th pass
ax dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_001_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 448, 448 ]
[ 88, 112, 233, 271, 307, 341 ]
31.568716
21.961153
0
158.942505
53.223251
105.561615
0
2,771.083496
0
0
0
0
2026-04-15T21:43:20
Breast_MRI_002
OK
datasets/raw_data/Breast_MRI_002/01-01-1990-NA-MRI BREAST BILATERAL W WO-51972/600.000000-ax 3d dyn-25442
datasets/raw_data/Breast_MRI_002/01-01-1990-NA-MRI BREAST BILATERAL W WO-51972/603.000000-Ph3ax 3d dyn-66447
false
ax 3d dyn
ph3/ax 3d dyn
0.880212
[ 0, 1, 1 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_002_lattice.pt
[ 3, 64, 64, 64 ]
[ 142, 512, 512 ]
[ 58, 72, 250, 294, 107, 136 ]
292.883545
412.202881
0
2,295.094971
10,578.494141
28,701.507813
0
455,671.625
54.811348
163.915176
-921.681274
1,424.798584
2026-04-15T21:43:36
Breast_MRI_003
OK
datasets/raw_data/Breast_MRI_003/01-01-1990-NA-MRI BREAST BILATERAL WWO-87435/500.000000-ax 3d dyn MP-06358
datasets/raw_data/Breast_MRI_003/01-01-1990-NA-MRI BREAST BILATERAL WWO-87435/504.000000-Ph4ax 3d dyn MP-41874
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.84451
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_003_lattice.pt
[ 3, 64, 64, 64 ]
[ 156, 512, 512 ]
[ 95, 108, 350, 412, 81, 139 ]
183.100433
346.936371
0
5,232.581055
9,886.324219
34,416.824219
0
1,112,746.875
50.539921
131.002808
-624.925293
3,002.60498
2026-04-15T21:43:53
Breast_MRI_001
REVIEW
datasets/raw_data/Breast_MRI_001/01-01-1990-NA-MRI BREAST BILATERAL WWO-97538/14.000000-ax dyn 4th pass-47500
datasets/raw_data/Breast_MRI_001/01-01-1990-NA-MRI BREAST BILATERAL WWO-97538/14.000000-ax dyn 4th pass-47500
true
ax dyn 4th pass
ax dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_001_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 448, 448 ]
[ 88, 112, 233, 271, 307, 341 ]
31.568716
21.961153
0
158.942505
53.223251
105.561615
0
2,771.083496
0
0
0
0
2026-04-15T21:45:10
Breast_MRI_002
OK
datasets/raw_data/Breast_MRI_002/01-01-1990-NA-MRI BREAST BILATERAL W WO-51972/600.000000-ax 3d dyn-25442
datasets/raw_data/Breast_MRI_002/01-01-1990-NA-MRI BREAST BILATERAL W WO-51972/603.000000-Ph3ax 3d dyn-66447
false
ax 3d dyn
ph3/ax 3d dyn
0.880212
[ 0, 1, 1 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_002_lattice.pt
[ 3, 64, 64, 64 ]
[ 142, 512, 512 ]
[ 58, 72, 250, 294, 107, 136 ]
292.883545
412.202881
0
2,295.094971
10,578.494141
28,701.507813
0
455,671.625
54.811348
163.915176
-921.681274
1,424.798584
2026-04-15T21:45:27
Breast_MRI_003
OK
datasets/raw_data/Breast_MRI_003/01-01-1990-NA-MRI BREAST BILATERAL WWO-87435/500.000000-ax 3d dyn MP-06358
datasets/raw_data/Breast_MRI_003/01-01-1990-NA-MRI BREAST BILATERAL WWO-87435/504.000000-Ph4ax 3d dyn MP-41874
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.84451
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_003_lattice.pt
[ 3, 64, 64, 64 ]
[ 156, 512, 512 ]
[ 95, 108, 350, 412, 81, 139 ]
183.100433
346.936371
0
5,232.581055
9,886.324219
34,416.824219
0
1,112,746.875
50.539921
131.002808
-624.925293
3,002.60498
2026-04-15T21:45:46
Breast_MRI_004
OK
datasets/raw_data/Breast_MRI_004/01-01-1990-NA-MRI BREAST BILATERAL WWO-68914/500.000000-ax 3d dyn-57340
datasets/raw_data/Breast_MRI_004/01-01-1990-NA-MRI BREAST BILATERAL WWO-68914/503.000000-Ph3ax 3d dyn-95896
false
ax 3d dyn
ph3/ax 3d dyn
0.809016
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_004_lattice.pt
[ 3, 64, 64, 64 ]
[ 164, 512, 512 ]
[ 85, 95, 261, 280, 192, 204 ]
156.962936
171.92421
0
1,059.304932
1,781.237671
4,365.889648
0
125,486.78125
35.837013
79.215034
-313.729553
620.015564
2026-04-15T21:46:03
Breast_MRI_005
REVIEW
datasets/raw_data/Breast_MRI_005/01-01-1990-NA-BREASTROUTINE CA-77718/11.000000-ax dyn 3rd pass-67472
datasets/raw_data/Breast_MRI_005/01-01-1990-NA-BREASTROUTINE CA-77718/11.000000-ax dyn 3rd pass-67472
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_005_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 448, 448 ]
[ 75, 122, 187, 213, 137, 178 ]
52.656296
93.356476
0
564.566711
521.182068
1,616.692505
0
32,833.160156
0
0
0
0
2026-04-15T21:46:13
Breast_MRI_006
REVIEW
datasets/raw_data/Breast_MRI_006/01-01-1990-NA-MRI BREAST BILATERAL WWO-27236/9.000000-ax 3d dyn 4th pass-99142
datasets/raw_data/Breast_MRI_006/01-01-1990-NA-MRI BREAST BILATERAL WWO-27236/9.000000-ax 3d dyn 4th pass-99142
true
ax 3d dyn 4th pass
ax 3d dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_006_lattice.pt
[ 3, 64, 64, 64 ]
[ 148, 512, 512 ]
[ 38, 48, 330, 371, 407, 434 ]
538.841309
1,159.295654
0
6,681.944336
65,521.675781
206,729.453125
0
4,879,856
0
0
0
0
2026-04-15T21:46:28
Breast_MRI_007
REVIEW
datasets/raw_data/Breast_MRI_007/01-01-1990-NA-BREASTROUTINE-39586/11.000000-ax dyn 3rd pass-48922
datasets/raw_data/Breast_MRI_007/01-01-1990-NA-BREASTROUTINE-39586/11.000000-ax dyn 3rd pass-48922
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_007_lattice.pt
[ 3, 64, 64, 64 ]
[ 208, 448, 448 ]
[ 99, 111, 207, 220, 270, 289 ]
124.133591
139.240509
0
628.098389
919.940674
1,828.992188
0
29,417.5
-0
0
-0
0
2026-04-15T21:46:42
Breast_MRI_008
REVIEW
datasets/raw_data/Breast_MRI_008/01-01-1990-NA-MRI BREAST BILATERAL WWO-56538/16.000000-ax dyn 4th pass-48106
datasets/raw_data/Breast_MRI_008/01-01-1990-NA-MRI BREAST BILATERAL WWO-56538/16.000000-ax dyn 4th pass-48106
true
ax dyn 4th pass
ax dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_008_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 448, 448 ]
[ 42, 55, 179, 206, 103, 135 ]
45.038036
64.448624
0
272.566193
202.166565
630.916626
0
9,048.822266
0
0
0
0
2026-04-15T21:46:53
Breast_MRI_009
OK
datasets/raw_data/Breast_MRI_009/01-01-1990-NA-MRI BREAST BILATERAL W WO-71702/600.000000-ax 3d dyn-66184
datasets/raw_data/Breast_MRI_009/01-01-1990-NA-MRI BREAST BILATERAL W WO-71702/603.000000-Ph3ax 3d dyn-90100
false
ax 3d dyn
ph3/ax 3d dyn
0.841952
[ 0, 1, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_009_lattice.pt
[ 3, 64, 64, 64 ]
[ 156, 512, 512 ]
[ 65, 91, 214, 270, 343, 388 ]
476.352448
502.583038
0
2,511.693359
13,696.977539
26,021.216797
0
439,791.125
206.242294
280.877777
-330.239014
1,919.496338
2026-04-15T21:47:07
Breast_MRI_010
OK
datasets/raw_data/Breast_MRI_010/01-01-1990-NA-MRI BREAST BILATERAL WWO-92212/600.000000-ax 3d dyn-21046
datasets/raw_data/Breast_MRI_010/01-01-1990-NA-MRI BREAST BILATERAL WWO-92212/603.000000-Ph3ax 3d dyn-64577
false
ax 3d dyn
ph3/ax 3d dyn
0.826524
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_010_lattice.pt
[ 3, 64, 64, 64 ]
[ 146, 512, 512 ]
[ 104, 132, 281, 349, 54, 112 ]
232.514893
391.799896
0
5,417.516602
14,464.700195
55,169.652344
0
1,884,835
86.832565
231.052963
-1,304.422729
4,092.339355
2026-04-15T21:47:20
Breast_MRI_011
OK
datasets/raw_data/Breast_MRI_011/01-01-1990-NA-MRI BREAST BILATERAL WWO-08502/500.000000-ax 3d dyn MP-96091
datasets/raw_data/Breast_MRI_011/01-01-1990-NA-MRI BREAST BILATERAL WWO-08502/504.000000-Ph4ax 3d dyn MP-44734
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.850043
[ 0, 1, 1 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_011_lattice.pt
[ 3, 64, 64, 64 ]
[ 184, 512, 512 ]
[ 51, 86, 264, 317, 371, 443 ]
357.527222
575.122925
0
4,532.801758
28,285.882813
71,377.289063
0
1,164,915
109.390053
251.221298
-876.292175
2,865.947754
2026-04-15T21:47:39
Breast_MRI_012
OK
datasets/raw_data/Breast_MRI_012/01-01-1990-NA-MRI BREAST BILATERAL W WO-75086/600.000000-ax dynamic-36221
datasets/raw_data/Breast_MRI_012/01-01-1990-NA-MRI BREAST BILATERAL W WO-75086/603.000000-Ph3ax dynamic-41756
false
ax dynamic
ph3/ax dynamic
0.91141
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_012_lattice.pt
[ 3, 64, 64, 64 ]
[ 178, 512, 512 ]
[ 46, 97, 238, 390, 295, 431 ]
496.944061
823.950195
0
10,591.748047
58,004.410156
173,949.03125
0
5,655,877
209.667755
416.041443
-1,039.01062
6,487.080078
2026-04-15T21:47:56
Breast_MRI_013
OK
datasets/raw_data/Breast_MRI_013/01-01-1990-NA-MRI BREAST BILATERAL WWO CONTRAST W 3D-95246/500.000000-ax dynamic-90045
datasets/raw_data/Breast_MRI_013/01-01-1990-NA-MRI BREAST BILATERAL WWO CONTRAST W 3D-95246/503.000000-Ph3ax dynamic-01831
false
ax dynamic
ph3/ax dynamic
0.815846
[ 0, 1, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_013_lattice.pt
[ 3, 64, 64, 64 ]
[ 174, 512, 512 ]
[ 55, 103, 289, 358, 118, 178 ]
1,071.648682
932.223938
0
5,859.289551
70,731.84375
115,298.296875
0
1,788,829.75
526.888794
620.536926
-2,856.32251
4,711.436035
2026-04-15T21:48:13
Breast_MRI_014
REVIEW
datasets/raw_data/Breast_MRI_014/01-01-1990-NA-BREASTROUTINE DYNAMIC-16086/12.000000-ax dyn 3rd pass-43375
datasets/raw_data/Breast_MRI_014/01-01-1990-NA-BREASTROUTINE DYNAMIC-16086/12.000000-ax dyn 3rd pass-43375
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_014_lattice.pt
[ 3, 64, 64, 64 ]
[ 176, 448, 448 ]
[ 53, 62, 160, 173, 94, 106 ]
111.031921
69.83989
0
258.839844
388.756927
911.635498
0
10,390.480469
0
0
0
0
2026-04-15T21:48:27
Breast_MRI_015
REVIEW
datasets/raw_data/Breast_MRI_015/01-01-1990-NA-MRI BREAST BILATERAL WWO-54345/14.000000-ax dyn 3rd pass-72199
datasets/raw_data/Breast_MRI_015/01-01-1990-NA-MRI BREAST BILATERAL WWO-54345/14.000000-ax dyn 3rd pass-72199
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_015_lattice.pt
[ 3, 64, 64, 64 ]
[ 112, 448, 448 ]
[ 75, 87, 142, 185, 81, 114 ]
61.509632
100.976891
0
596.065063
587.768433
1,278.29248
0
15,530.123047
-0
0
-0.000008
0
2026-04-15T21:48:35
Breast_MRI_016
OK
datasets/raw_data/Breast_MRI_016/01-01-1990-NA-MRI BREAST BILATERAL W WO-58730/600.000000-ax dyn-93367
datasets/raw_data/Breast_MRI_016/01-01-1990-NA-MRI BREAST BILATERAL W WO-58730/604.000000-Ph4ax dyn-53134
false
ax dyn
ph4/ax dyn
0.832007
[ 0, 1, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_016_lattice.pt
[ 3, 64, 64, 64 ]
[ 164, 512, 512 ]
[ 51, 106, 289, 389, 86, 170 ]
440.484589
525.978943
0
4,571.384766
14,773.59082
30,989.294922
0
449,052.6875
174.184189
348.611237
-882.324829
3,601.039551
2026-04-15T21:48:50
Breast_MRI_017
REVIEW
datasets/raw_data/Breast_MRI_017/01-01-1990-NA-BREASTROUTINE DYNAMICS-26640/16.000000-ax dyn 3rd pass-21608
datasets/raw_data/Breast_MRI_017/01-01-1990-NA-BREASTROUTINE DYNAMICS-26640/16.000000-ax dyn 3rd pass-21608
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_017_lattice.pt
[ 3, 64, 64, 64 ]
[ 176, 448, 448 ]
[ 107, 120, 54, 74, 305, 321 ]
11.74395
16.599215
0
213.639999
26.931808
221.62558
0
6,139.550781
0
0
0
0
2026-04-15T21:49:02
Breast_MRI_018
REVIEW
datasets/raw_data/Breast_MRI_018/01-01-1990-NA-BREASTROUTINE DYNAMIC-32826/14.000000-ax dyn 3rd pass-71840
datasets/raw_data/Breast_MRI_018/01-01-1990-NA-BREASTROUTINE DYNAMIC-32826/14.000000-ax dyn 3rd pass-71840
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_018_lattice.pt
[ 3, 64, 64, 64 ]
[ 208, 448, 448 ]
[ 143, 164, 108, 188, 83, 120 ]
10.626143
31.818104
0
335.693787
62.438519
284.218109
0
4,129.509766
0
0
0
0
2026-04-15T21:49:16
Breast_MRI_019
REVIEW
datasets/raw_data/Breast_MRI_019/01-01-1990-NA-MRI BREAST BILATERAL WWO-57702/11.000000-ax dyn 3rd pass-87531
datasets/raw_data/Breast_MRI_019/01-01-1990-NA-MRI BREAST BILATERAL WWO-57702/11.000000-ax dyn 3rd pass-87531
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_019_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 320, 320 ]
[ 62, 97, 111, 139, 194, 240 ]
123.710876
161.131577
0
943.294067
1,706.906738
3,648.461914
0
67,747.023438
-0
0
-0
0
2026-04-15T21:49:21
Breast_MRI_020
WARNING
datasets/raw_data/Breast_MRI_020/01-01-1990-NA-MRI BREAST BILATERAL WWO-60613/500.000000-ax 3d dyn-20070
datasets/raw_data/Breast_MRI_020/01-01-1990-NA-MRI BREAST BILATERAL WWO-60613/503.000000-Ph3ax 3d dyn-19491
false
ax 3d dyn
ph3/ax 3d dyn
0.758793
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_020_lattice.pt
[ 3, 64, 64, 64 ]
[ 174, 512, 512 ]
[ 77, 91, 378, 411, 400, 438 ]
188.061646
319.002136
0
2,226.634521
5,771.010254
18,599.541016
0
368,101.25
65.818115
178.260345
-431.358856
1,526.085693
2026-04-15T21:49:39
Breast_MRI_021
WARNING
datasets/raw_data/Breast_MRI_021/01-01-1990-NA-MRI BREAST BILATERAL W WO-79396/600.000000-ax dynamic-73046
datasets/raw_data/Breast_MRI_021/01-01-1990-NA-MRI BREAST BILATERAL W WO-79396/603.000000-Ph3ax dynamic-36887
false
ax dynamic
ph3/ax dynamic
0.681621
[ 0, 7, 3 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_021_lattice.pt
[ 3, 64, 64, 64 ]
[ 176, 512, 512 ]
[ 113, 131, 323, 359, 72, 109 ]
243.112274
286.567413
0
4,352.705078
9,449.05957
39,998.851563
0
1,723,386.5
17.484861
271.343506
-1,523.383911
4,141.882324
2026-04-15T21:49:57
Breast_MRI_022
REVIEW
datasets/raw_data/Breast_MRI_022/01-01-1990-NA-MRI BREAST BILATERAL WWO-87462/19.000000-ax dyn 4th pass-88681
datasets/raw_data/Breast_MRI_022/01-01-1990-NA-MRI BREAST BILATERAL WWO-87462/19.000000-ax dyn 4th pass-88681
true
ax dyn 4th pass
ax dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_022_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 448, 448 ]
[ 47, 81, 72, 110, 315, 366 ]
63.106247
48.657871
0
313.528412
240.320068
415.469177
0
6,351.796875
0
0
0
0
2026-04-15T21:50:08
Breast_MRI_023
REVIEW
datasets/raw_data/Breast_MRI_023/01-01-1990-NA-BREASTROUTINE CA-76733/11.000000-ax dyn 3rd pass-05076
datasets/raw_data/Breast_MRI_023/01-01-1990-NA-BREASTROUTINE CA-76733/11.000000-ax dyn 3rd pass-05076
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_023_lattice.pt
[ 3, 64, 64, 64 ]
[ 192, 448, 448 ]
[ 92, 115, 113, 155, 339, 369 ]
50.81538
75.057854
0
469.325317
355.986267
1,023.049988
0
15,399.041016
-0
0
-0.000004
0
2026-04-15T21:50:22
Breast_MRI_024
OK
datasets/raw_data/Breast_MRI_024/01-01-1990-NA-MRI BREAST BILATERAL W WO-98313/600.000000-ax dynamic-64443
datasets/raw_data/Breast_MRI_024/01-01-1990-NA-MRI BREAST BILATERAL W WO-98313/603.000000-Ph3ax dynamic-59561
false
ax dynamic
ph3/ax dynamic
0.866693
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_024_lattice.pt
[ 3, 64, 64, 64 ]
[ 180, 512, 512 ]
[ 88, 94, 390, 398, 197, 206 ]
1,772.578125
1,698.589111
0
5,510.506348
98,294.3125
343,773.75
0
4,019,776.5
991.1474
1,050.803223
-180.412292
3,528.330078
2026-04-15T21:50:40
Breast_MRI_025
OK
datasets/raw_data/Breast_MRI_025/01-01-1990-NA-MRI BREAST BILATERAL W WO-85780/500.000000-ax 3d dyn-77160
datasets/raw_data/Breast_MRI_025/01-01-1990-NA-MRI BREAST BILATERAL W WO-85780/503.000000-Ph3ax 3d dyn-52571
false
ax 3d dyn
ph3/ax 3d dyn
0.85263
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_025_lattice.pt
[ 3, 64, 64, 64 ]
[ 156, 512, 512 ]
[ 28, 46, 222, 252, 68, 94 ]
393.193573
303.629486
0
3,305.532227
11,489.379883
28,143.363281
0
949,055.875
107.716354
204.055817
-671.397522
2,480.165527
2026-04-15T21:50:53
Breast_MRI_026
REVIEW
datasets/raw_data/Breast_MRI_026/01-01-1990-NA-BREASTROUTINE-02973/16.000000-ax dyn 3rd pass-54075
datasets/raw_data/Breast_MRI_026/01-01-1990-NA-BREASTROUTINE-02973/16.000000-ax dyn 3rd pass-54075
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_026_lattice.pt
[ 3, 64, 64, 64 ]
[ 208, 448, 448 ]
[ 157, 184, 152, 197, 75, 115 ]
7.723679
11.101177
0
217.189896
16.57513
127.849594
0
4,485.190918
-0
0
-0.000001
0
2026-04-15T21:51:08
Breast_MRI_027
REVIEW
datasets/raw_data/Breast_MRI_027/01-01-1990-NA-BREASTROUTINE DYNAMICS-55404/12.000000-ax dyn 3rd pass-69887
datasets/raw_data/Breast_MRI_027/01-01-1990-NA-BREASTROUTINE DYNAMICS-55404/12.000000-ax dyn 3rd pass-69887
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_027_lattice.pt
[ 3, 64, 64, 64 ]
[ 192, 448, 448 ]
[ 81, 99, 186, 214, 70, 99 ]
117.494179
71.972031
0
375.437134
525.762024
1,064.793823
0
21,698.734375
-0
0
-0
0
2026-04-15T21:51:21
Breast_MRI_028
REVIEW
datasets/raw_data/Breast_MRI_028/01-01-1990-NA-BREASTROUTINE-58770/12.000000-ax dyn 3rd pass-75775
datasets/raw_data/Breast_MRI_028/01-01-1990-NA-BREASTROUTINE-58770/12.000000-ax dyn 3rd pass-75775
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_028_lattice.pt
[ 3, 64, 64, 64 ]
[ 208, 448, 448 ]
[ 77, 146, 100, 189, 258, 338 ]
100.10585
129.788147
0
780.878052
1,222.986816
2,807.739014
0
49,576.492188
-0
0
-0.000031
0
2026-04-15T21:51:37
Breast_MRI_029
OK
datasets/raw_data/Breast_MRI_029/01-01-1990-NA-MR BREAST BILAT W AND W-O CONT -DR-55714/400.000000-Ax Vibrant MultiPhase-01081
datasets/raw_data/Breast_MRI_029/01-01-1990-NA-MR BREAST BILAT W AND W-O CONT -DR-55714/404.000000-Ph4Ax Vibrant MultiPhase-34409
false
ax vibrant multiphase
ph4/ax vibrant multiphase
0.865884
[ 0, 1, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_029_lattice.pt
[ 3, 64, 64, 64 ]
[ 192, 512, 512 ]
[ 164, 171, 290, 309, 379, 401 ]
0
0
0
0
0
0
0
0
0
0
-0
0
2026-04-15T21:51:58
Breast_MRI_030
OK
datasets/raw_data/Breast_MRI_030/01-01-1990-NA-MRI BREAST BILATERAL WWO-47611/500.000000-ax 3d dyn MP-00288
datasets/raw_data/Breast_MRI_030/01-01-1990-NA-MRI BREAST BILATERAL WWO-47611/504.000000-Ph4ax 3d dyn MP-03747
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.839884
[ 0, 1, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_030_lattice.pt
[ 3, 64, 64, 64 ]
[ 190, 512, 512 ]
[ 103, 116, 242, 282, 113, 151 ]
489.591461
796.671692
0
6,574.022949
42,422.039063
109,107.21875
0
2,120,637.5
224.60788
523.925659
-3,954.041504
5,011.341797
2026-04-15T21:52:18
Breast_MRI_031
OK
datasets/raw_data/Breast_MRI_031/01-01-1990-NA-MRI BREAST BILATERAL WWO-78686/500.000000-ax 3d dyn MP-43849
datasets/raw_data/Breast_MRI_031/01-01-1990-NA-MRI BREAST BILATERAL WWO-78686/504.000000-Ph4ax 3d dyn MP-04215
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.886947
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_031_lattice.pt
[ 3, 64, 64, 64 ]
[ 162, 512, 512 ]
[ 88, 108, 404, 438, 374, 411 ]
987.555176
747.620605
0
5,494.447754
66,335.726563
168,081.84375
0
4,064,623
351.463928
363.152191
-1,134.818726
4,049.172363
2026-04-15T21:52:32
Breast_MRI_032
OK
datasets/raw_data/Breast_MRI_032/01-01-1990-NA-MRI BREAST BILATERAL W WO-05540/500.000000-ax dyn-48775
datasets/raw_data/Breast_MRI_032/01-01-1990-NA-MRI BREAST BILATERAL W WO-05540/504.000000-Ph4ax dyn-62169
false
ax dyn
ph4/ax dyn
0.815547
[ 0, 1, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_032_lattice.pt
[ 3, 64, 64, 64 ]
[ 178, 512, 512 ]
[ 109, 125, 338, 383, 334, 398 ]
75.31739
186.5121
0
2,092.545654
3,494.19458
12,068.245117
0
160,934.171875
10.868683
64.168831
-479.15274
1,226.629028
2026-04-15T21:52:50
Breast_MRI_033
WARNING
datasets/raw_data/Breast_MRI_033/01-01-1990-NA-e1 MRI 3D REFORMATION NON INDEPENDENT WORKSTATION-25139/500.000000-ax dynamic-61308
datasets/raw_data/Breast_MRI_033/01-01-1990-NA-e1 MRI 3D REFORMATION NON INDEPENDENT WORKSTATION-25139/503.000000-Ph3ax dynamic-30246
false
ax dynamic
ph3/ax dynamic
0.78888
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_033_lattice.pt
[ 3, 64, 64, 64 ]
[ 174, 512, 512 ]
[ 81, 115, 294, 396, 100, 161 ]
159.19696
378.670258
0
4,596.447754
10,188.364258
43,108.296875
0
1,171,463
53.042099
189.454987
-874.472168
3,315.266846
2026-04-15T21:53:11
Breast_MRI_034
OK
datasets/raw_data/Breast_MRI_034/01-01-1990-NA-MRI BREAST BILATERAL WWO-28904/800.000000-ax 3d dyn MP-44471
datasets/raw_data/Breast_MRI_034/01-01-1990-NA-MRI BREAST BILATERAL WWO-28904/804.000000-Ph4ax 3d dyn MP-70533
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.906876
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_034_lattice.pt
[ 3, 64, 64, 64 ]
[ 148, 512, 512 ]
[ 47, 93, 308, 449, 360, 430 ]
269.198364
633.124939
0
8,210.011719
27,283.933594
97,988.09375
0
3,383,809.5
113.469574
312.474548
-449.753571
4,738.862793
2026-04-15T21:53:29
Breast_MRI_035
OK
datasets/raw_data/Breast_MRI_035/01-01-1990-NA-MRI BREAST BILATERAL WWO-43376/500.000000-ax 3d dyn MP-89635
datasets/raw_data/Breast_MRI_035/01-01-1990-NA-MRI BREAST BILATERAL WWO-43376/504.000000-Ph4ax 3d dyn MP-66741
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.820365
[ 0, 1, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_035_lattice.pt
[ 3, 64, 64, 64 ]
[ 166, 512, 512 ]
[ 87, 117, 279, 353, 82, 126 ]
364.917542
645.309265
0
6,340.117676
23,587.214844
83,219.78125
0
3,405,665.5
116.983948
267.256653
-595.921387
4,429.098633
2026-04-15T21:53:48
Breast_MRI_036
OK
datasets/raw_data/Breast_MRI_036/01-01-1990-NA-MRI BREAST BILATERAL W WO-01794/600.000000-ax 3d dyn-78090
datasets/raw_data/Breast_MRI_036/01-01-1990-NA-MRI BREAST BILATERAL W WO-01794/603.000000-Ph3ax 3d dyn-89934
false
ax 3d dyn
ph3/ax 3d dyn
0.810334
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_036_lattice.pt
[ 3, 64, 64, 64 ]
[ 144, 512, 512 ]
[ 100, 114, 301, 329, 357, 389 ]
307.649139
313.446564
0
2,179.432373
8,865.083008
21,646.103516
0
353,129.4375
142.85585
205.879013
-594.15625
2,037.316772
2026-04-15T21:54:04
Breast_MRI_037
REVIEW
datasets/raw_data/Breast_MRI_037/01-01-1990-NA-MRI BREAST BILATERAL WWO-90987/11.000000-ax dyn 3rd pass-65114
datasets/raw_data/Breast_MRI_037/01-01-1990-NA-MRI BREAST BILATERAL WWO-90987/11.000000-ax dyn 3rd pass-65114
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_037_lattice.pt
[ 3, 64, 64, 64 ]
[ 144, 320, 320 ]
[ 87, 95, 103, 114, 212, 225 ]
69.578255
66.140167
0
341.353058
244.119888
633.68988
0
6,039.920898
0
0
0
0
2026-04-15T21:54:09
Breast_MRI_038
OK
datasets/raw_data/Breast_MRI_038/01-01-1990-NA-MRI BREAST BILATERAL W WO-41591/500.000000-ax 3d dyn-60939
datasets/raw_data/Breast_MRI_038/01-01-1990-NA-MRI BREAST BILATERAL W WO-41591/503.000000-Ph3ax 3d dyn-79199
false
ax 3d dyn
ph3/ax 3d dyn
0.876221
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_038_lattice.pt
[ 3, 64, 64, 64 ]
[ 162, 512, 512 ]
[ 120, 139, 254, 291, 369, 410 ]
312.702637
279.564545
0
4,420.015137
10,133.526367
38,799.273438
0
1,148,596
122.343063
163.546158
-291.102478
3,451.283447
2026-04-15T21:54:26
Breast_MRI_039
REVIEW
datasets/raw_data/Breast_MRI_039/01-01-1990-NA-MRI BREAST BILATERAL WWO-72465/13.000000-ax dyn 4th pass-19196
datasets/raw_data/Breast_MRI_039/01-01-1990-NA-MRI BREAST BILATERAL WWO-72465/13.000000-ax dyn 4th pass-19196
true
ax dyn 4th pass
ax dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_039_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 448, 448 ]
[ 63, 77, 249, 271, 339, 360 ]
38.148861
23.714527
0
147.161163
54.711906
142.257919
0
3,026.165527
0
0
0
0
2026-04-15T21:54:37
Breast_MRI_040
REVIEW
datasets/raw_data/Breast_MRI_040/01-01-1990-NA-MRI BREAST BILATERAL WWO-63729/13.000000-ax dyn 4th pass-63018
datasets/raw_data/Breast_MRI_040/01-01-1990-NA-MRI BREAST BILATERAL WWO-63729/13.000000-ax dyn 4th pass-63018
true
ax dyn 4th pass
ax dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_040_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 448, 448 ]
[ 70, 102, 162, 247, 63, 112 ]
13.127491
24.825985
0
174.515915
35.059238
99.261139
0
1,439.964233
0
0
0
0
2026-04-15T21:54:48
Breast_MRI_041
OK
datasets/raw_data/Breast_MRI_041/01-01-1990-NA-MRI BREAST BILATERAL WWO-63832/500.000000-ax 3d dyn MP-60093
datasets/raw_data/Breast_MRI_041/01-01-1990-NA-MRI BREAST BILATERAL WWO-63832/504.000000-Ph4ax 3d dyn MP-74038
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.813789
[ 0, 1, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_041_lattice.pt
[ 3, 64, 64, 64 ]
[ 168, 512, 512 ]
[ 68, 100, 294, 360, 123, 164 ]
572.419495
958.773376
0
7,133.211914
50,361.117188
128,843.453125
0
2,562,846
260.395386
565.475281
-782
5,279.814941
2026-04-15T21:55:04
Breast_MRI_042
REVIEW
datasets/raw_data/Breast_MRI_042/01-01-1990-NA-BREASTlesion evaluation-16139/13.000000-ax dyn 3rd pass-88122
datasets/raw_data/Breast_MRI_042/01-01-1990-NA-BREASTlesion evaluation-16139/13.000000-ax dyn 3rd pass-88122
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_042_lattice.pt
[ 3, 64, 64, 64 ]
[ 192, 448, 448 ]
[ 87, 136, 81, 159, 119, 162 ]
30.123308
73.414207
0
783.663391
427.168549
1,610.791016
0
35,575.84375
-0
0
-0.000008
0
2026-04-15T21:55:17
Breast_MRI_043
REVIEW
datasets/raw_data/Breast_MRI_043/01-01-1990-NA-MRI BREAST BILATERAL WWO-97495/8.000000-ax 3d dyn 4th pass-17280
datasets/raw_data/Breast_MRI_043/01-01-1990-NA-MRI BREAST BILATERAL WWO-97495/8.000000-ax 3d dyn 4th pass-17280
true
ax 3d dyn 4th pass
ax 3d dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_043_lattice.pt
[ 3, 64, 64, 64 ]
[ 188, 512, 512 ]
[ 114, 143, 245, 292, 366, 408 ]
1,141.309448
912.69458
0
4,786.833984
72,042.945313
137,455.40625
0
1,864,151.25
0
0
0
0
2026-04-15T21:55:35
Breast_MRI_044
REVIEW
datasets/raw_data/Breast_MRI_044/01-01-1990-NA-MRI BREAST BILATERAL WWO-20599/16.000000-ax dyn 4th pass-57432
datasets/raw_data/Breast_MRI_044/01-01-1990-NA-MRI BREAST BILATERAL WWO-20599/16.000000-ax dyn 4th pass-57432
true
ax dyn 4th pass
ax dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_044_lattice.pt
[ 3, 64, 64, 64 ]
[ 128, 448, 448 ]
[ 71, 85, 159, 194, 297, 337 ]
30.31287
43.7742
0
250.276566
98.201035
325.931183
0
7,850.168945
0
0
0
0
2026-04-15T21:55:43
Breast_MRI_045
OK
datasets/raw_data/Breast_MRI_045/01-01-1990-NA-MRI BREAST BILATERAL W WO-89008/500.000000-ax dyn-17508
datasets/raw_data/Breast_MRI_045/01-01-1990-NA-MRI BREAST BILATERAL W WO-89008/503.000000-Ph3ax dyn-87454
false
ax dyn
ph3/ax dyn
0.807212
[ 0, 1, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_045_lattice.pt
[ 3, 64, 64, 64 ]
[ 188, 512, 512 ]
[ 49, 82, 287, 352, 127, 190 ]
302.131775
268.158112
0
2,776.02002
7,861.216797
17,478.824219
0
511,041
89.951691
137.239532
-446.581451
2,064.536621
2026-04-15T21:56:01
Breast_MRI_046
REVIEW
datasets/raw_data/Breast_MRI_046/01-01-1990-NA-BREASTROUTINE-96576/11.000000-ax dyn 3rd pass-76285
datasets/raw_data/Breast_MRI_046/01-01-1990-NA-BREASTROUTINE-96576/11.000000-ax dyn 3rd pass-76285
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_046_lattice.pt
[ 3, 64, 64, 64 ]
[ 256, 448, 448 ]
[ 101, 190, 98, 205, 76, 162 ]
38.916683
60.925163
0
694.986084
330.390656
762.884277
0
17,664.128906
-0
0
-0.000015
0
2026-04-15T21:56:18
Breast_MRI_047
WARNING
datasets/raw_data/Breast_MRI_047/01-01-1990-NA-MRI BREAST BILATERAL WWO-25878/500.000000-ax 3d dyn-46655
datasets/raw_data/Breast_MRI_047/01-01-1990-NA-MRI BREAST BILATERAL WWO-25878/503.000000-Ph3ax 3d dyn-73650
false
ax 3d dyn
ph3/ax 3d dyn
0.757251
[ 0, -1, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_047_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 512, 512 ]
[ 60, 94, 335, 398, 115, 163 ]
250.39238
326.279694
0
2,664.440186
8,406.15332
21,160.451172
0
346,837.875
80.406708
197.826324
-822.396057
2,088.461914
2026-04-15T21:56:33
Breast_MRI_048
REVIEW
datasets/raw_data/Breast_MRI_048/01-01-1990-NA-BREASTROUTINE DYNAMICS-77405/11.000000-ax dyn 3rd pass-70193
datasets/raw_data/Breast_MRI_048/01-01-1990-NA-BREASTROUTINE DYNAMICS-77405/11.000000-ax dyn 3rd pass-70193
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_048_lattice.pt
[ 3, 64, 64, 64 ]
[ 176, 448, 448 ]
[ 88, 109, 121, 154, 275, 298 ]
79.028595
73.071053
0
416.295807
348.168213
819.688293
0
11,301.506836
0
0
0
0
2026-04-15T21:56:44
Breast_MRI_049
REVIEW
datasets/raw_data/Breast_MRI_049/01-01-1990-NA-MRI BREAST BILATERAL WWO-47069/8.000000-ax 3d dyn 4th pass-10927
datasets/raw_data/Breast_MRI_049/01-01-1990-NA-MRI BREAST BILATERAL WWO-47069/8.000000-ax 3d dyn 4th pass-10927
true
ax 3d dyn 4th pass
ax 3d dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_049_lattice.pt
[ 3, 64, 64, 64 ]
[ 164, 512, 512 ]
[ 55, 65, 325, 348, 376, 395 ]
1,393.016602
1,408.230591
0
5,321.644043
81,240.304688
196,840.9375
0
2,677,200.5
0
0
0
0
2026-04-15T21:56:57
Breast_MRI_050
OK
datasets/raw_data/Breast_MRI_050/01-01-1990-NA-MR BREAST BILAT W AND WO CONT-DR-52992/500.000000-Ax Vibrant MultiPhase-51377
datasets/raw_data/Breast_MRI_050/01-01-1990-NA-MR BREAST BILAT W AND WO CONT-DR-52992/504.000000-Ph4Ax Vibrant MultiPhase-66263
false
ax vibrant multiphase
ph4/ax vibrant multiphase
0.959993
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_050_lattice.pt
[ 3, 64, 64, 64 ]
[ 192, 512, 512 ]
[ 66, 83, 350, 371, 327, 352 ]
218.47287
447.732452
0
2,648.399414
10,294.573242
36,686.289063
0
610,622.1875
53.70742
125.409157
-75.750671
1,578.367676
2026-04-15T21:57:15
Breast_MRI_051
OK
datasets/raw_data/Breast_MRI_051/01-01-1990-NA-MRI BREAST BILATERAL WWO-57198/800.000000-ax 3d dyn-92797
datasets/raw_data/Breast_MRI_051/01-01-1990-NA-MRI BREAST BILATERAL WWO-57198/803.000000-Ph3ax 3d dyn-09091
false
ax 3d dyn
ph3/ax 3d dyn
0.886692
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_051_lattice.pt
[ 3, 64, 64, 64 ]
[ 200, 512, 512 ]
[ 100, 113, 290, 336, 372, 389 ]
78.948975
239.496613
0
2,412
3,969.946289
15,847.836914
0
400,034.40625
31.764671
110.31974
-511.04364
1,664
2026-04-15T21:57:33
Breast_MRI_052
REVIEW
datasets/raw_data/Breast_MRI_052/01-01-1990-NA-BREASTROUTINEDYNAMICS-37889/13.000000-ax dyn 3rd pass-83003
datasets/raw_data/Breast_MRI_052/01-01-1990-NA-BREASTROUTINEDYNAMICS-37889/13.000000-ax dyn 3rd pass-83003
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_052_lattice.pt
[ 3, 64, 64, 64 ]
[ 128, 448, 448 ]
[ 53, 67, 147, 173, 339, 361 ]
110.721092
93.113556
0
432.072693
640.224121
1,207.45459
0
18,533.082031
-0
0
-0.000015
0
2026-04-15T21:57:43
Breast_MRI_053
OK
datasets/raw_data/Breast_MRI_053/01-01-1990-NA-MRI BREAST BILATERAL WWO-57340/500.000000-ax 3d dyn-16045
datasets/raw_data/Breast_MRI_053/01-01-1990-NA-MRI BREAST BILATERAL WWO-57340/503.000000-Ph3ax 3d dyn-46972
false
ax 3d dyn
ph3/ax 3d dyn
0.83339
[ -1, 1, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_053_lattice.pt
[ 3, 64, 64, 64 ]
[ 176, 512, 512 ]
[ 80, 104, 294, 341, 101, 136 ]
789.678284
824.20459
0
3,966.806641
35,047.335938
79,403.71875
0
996,364.125
216.66658
393.547516
-1,680.687256
3,773.651855
2026-04-15T21:57:58
Breast_MRI_054
REVIEW
datasets/raw_data/Breast_MRI_054/01-01-1990-NA-MRI BREAST BILATERAL WWO-27832/8.000000-ax 3d dyn 4th pass-86023
datasets/raw_data/Breast_MRI_054/01-01-1990-NA-MRI BREAST BILATERAL WWO-27832/8.000000-ax 3d dyn 4th pass-86023
true
ax 3d dyn 4th pass
ax 3d dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_054_lattice.pt
[ 3, 64, 64, 64 ]
[ 178, 512, 512 ]
[ 89, 112, 401, 440, 114, 157 ]
2,150.846924
2,574.441162
0
16,674.947266
464,326.25
1,057,756.25
0
20,140,092
-0
0
-0.000031
0
2026-04-15T21:58:13
Breast_MRI_055
OK
datasets/raw_data/Breast_MRI_055/01-01-1990-NA-MRI BREAST BILATERAL WWO-16522/600.000000-ax 3d dyn MP-08824
datasets/raw_data/Breast_MRI_055/01-01-1990-NA-MRI BREAST BILATERAL WWO-16522/604.000000-Ph4ax 3d dyn MP-08494
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.823869
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_055_lattice.pt
[ 3, 64, 64, 64 ]
[ 170, 512, 512 ]
[ 57, 76, 245, 286, 109, 142 ]
526.546082
618.170837
0
3,703.753906
29,093.048828
74,821.867188
0
1,116,731.75
157.244293
272.643677
-794.785339
2,191.953857
2026-04-15T21:58:28
Breast_MRI_056
WARNING
datasets/raw_data/Breast_MRI_056/01-01-1990-NA-MRI BREAST BILATERAL WWO-94337/800.000000-ax 3d dyn-99320
datasets/raw_data/Breast_MRI_056/01-01-1990-NA-MRI BREAST BILATERAL WWO-94337/803.000000-Ph3ax 3d dyn-83229
false
ax 3d dyn
ph3/ax 3d dyn
0.780458
[ -2, 1, -2 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_056_lattice.pt
[ 3, 64, 64, 64 ]
[ 196, 512, 512 ]
[ 136, 172, 249, 316, 108, 185 ]
187.496887
283.065247
0
3,268.758789
6,717.879395
19,784.136719
0
302,605.125
66.903633
211.270126
-2,033.608276
3,019.393799
2026-04-15T21:58:45
Breast_MRI_057
REVIEW
datasets/raw_data/Breast_MRI_057/01-01-1990-NA-BREASTROUTINE DYNAMIC-90347/22.000000-ax dyn 3rd pass-05887
datasets/raw_data/Breast_MRI_057/01-01-1990-NA-BREASTROUTINE DYNAMIC-90347/22.000000-ax dyn 3rd pass-05887
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_057_lattice.pt
[ 3, 64, 64, 64 ]
[ 112, 448, 448 ]
[ 37, 94, 168, 251, 64, 165 ]
109.806313
128.60791
0
765.204895
1,159.94751
2,786.910156
0
40,309.15625
-0
0
-0
0
2026-04-15T21:58:53
Breast_MRI_058
WARNING
datasets/raw_data/Breast_MRI_058/01-01-1990-NA-MRI BREAST BILATERAL W WO-43028/500.000000-ax 3d dyn-70972
datasets/raw_data/Breast_MRI_058/01-01-1990-NA-MRI BREAST BILATERAL W WO-43028/503.000000-Ph3ax 3d dyn-79447
false
ax 3d dyn
ph3/ax 3d dyn
0.684614
[ 1, 0, 6 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_058_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 512, 512 ]
[ 98, 118, 300, 363, 95, 155 ]
221.660065
258.588287
0
1,997.509766
4,961.928711
10,159.449219
0
223,826.1875
65.050056
170.861328
-894.908752
1,600.717285
2026-04-15T21:59:07
Breast_MRI_059
OK
datasets/raw_data/Breast_MRI_059/01-01-1990-NA-MRI BREAST BILATERAL WWO-32446/500.000000-ax 3d dyn-40958
datasets/raw_data/Breast_MRI_059/01-01-1990-NA-MRI BREAST BILATERAL WWO-32446/503.000000-Ph3ax 3d dyn-26205
false
ax 3d dyn
ph3/ax 3d dyn
0.884546
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_059_lattice.pt
[ 3, 64, 64, 64 ]
[ 182, 512, 512 ]
[ 78, 92, 364, 396, 147, 167 ]
645.295776
1,015.840149
0
5,540.403809
64,093.703125
171,681.40625
0
3,236,172
317.258698
540.224304
-361.402405
3,740.009277
2026-04-15T21:59:25
Breast_MRI_060
OK
datasets/raw_data/Breast_MRI_060/01-01-1990-NA-MRI BREAST BILATERAL WWO-38212/500.000000-ax 3d dyn MP-63967
datasets/raw_data/Breast_MRI_060/01-01-1990-NA-MRI BREAST BILATERAL WWO-38212/504.000000-Ph4ax 3d dyn MP-65786
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.88537
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_060_lattice.pt
[ 3, 64, 64, 64 ]
[ 178, 512, 512 ]
[ 113, 135, 219, 271, 363, 413 ]
595.843811
659.213135
0
5,813.208008
36,212.054688
87,384.8125
0
2,007,253
254.249374
352.580872
-692.1875
4,215.898926
2026-04-15T21:59:42
Breast_MRI_061
OK
datasets/raw_data/Breast_MRI_061/01-01-1990-NA-MRI BREAST BILATERAL W WO-56402/600.000000-ax dynamic-64740
datasets/raw_data/Breast_MRI_061/01-01-1990-NA-MRI BREAST BILATERAL W WO-56402/603.000000-Ph3ax dynamic-88459
false
ax dynamic
ph3/ax dynamic
0.811429
[ 0, 2, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_061_lattice.pt
[ 3, 64, 64, 64 ]
[ 174, 512, 512 ]
[ 60, 102, 256, 381, 77, 166 ]
430.909241
775.8349
0
5,423.785645
32,143.638672
88,864.25
0
2,852,505
206.409698
437.580292
-578.911865
4,206.296875
2026-04-15T21:59:59
Breast_MRI_062
OK
datasets/raw_data/Breast_MRI_062/01-01-1990-NA-MRI BREAST BILATERAL WWO-95260/600.000000-ax 3d dyn MP-52445
datasets/raw_data/Breast_MRI_062/01-01-1990-NA-MRI BREAST BILATERAL WWO-95260/604.000000-Ph4ax 3d dyn MP-60178
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.819021
[ 0, 1, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_062_lattice.pt
[ 3, 64, 64, 64 ]
[ 164, 512, 512 ]
[ 105, 121, 323, 345, 111, 139 ]
489.269775
400.97995
0
4,415.705566
14,576.049805
41,366.160156
0
1,944,532
214.829407
213.800232
-365.48111
3,096.019531
2026-04-15T22:00:13
Breast_MRI_063
REVIEW
datasets/raw_data/Breast_MRI_063/01-01-1990-NA-BREASTROUTINE CA-65532/11.000000-ax dyn 3rd pass-27886
datasets/raw_data/Breast_MRI_063/01-01-1990-NA-BREASTROUTINE CA-65532/11.000000-ax dyn 3rd pass-27886
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_063_lattice.pt
[ 3, 64, 64, 64 ]
[ 176, 448, 448 ]
[ 66, 146, 76, 193, 44, 181 ]
65.089775
92.105576
0
1,051.996704
728.032898
1,822.785522
0
33,933.984375
-0
0
-0
0
2026-04-15T22:00:25
Breast_MRI_064
REVIEW
datasets/raw_data/Breast_MRI_064/01-01-1990-NA-MRI BREAST BILATERAL WWO-74041/9.000000-ax 3d dyn 4th pass-27923
datasets/raw_data/Breast_MRI_064/01-01-1990-NA-MRI BREAST BILATERAL WWO-74041/9.000000-ax 3d dyn 4th pass-27923
true
ax 3d dyn 4th pass
ax 3d dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_064_lattice.pt
[ 3, 64, 64, 64 ]
[ 162, 512, 512 ]
[ 81, 98, 278, 312, 97, 137 ]
1,078.976563
1,374.464355
0
5,604.758301
83,473.890625
159,322.15625
0
2,238,062
0
0
0
0
2026-04-15T22:01:49
Breast_MRI_065
OK
datasets/raw_data/Breast_MRI_065/01-01-1990-NA-MRI BREAST BILATERAL W WO-00968/700.000000-ax dynamic-26138
datasets/raw_data/Breast_MRI_065/01-01-1990-NA-MRI BREAST BILATERAL W WO-00968/703.000000-Ph3ax dynamic-87062
false
ax dynamic
ph3/ax dynamic
0.929163
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_065_lattice.pt
[ 3, 64, 64, 64 ]
[ 174, 512, 512 ]
[ 20, 64, 266, 317, 126, 186 ]
997.636475
674.650452
0
3,880.209229
36,003.167969
82,158.007813
0
1,339,715.5
-29.690104
261.850128
-2,019.254395
2,144.518555
2026-04-15T22:02:06
Breast_MRI_066
OK
datasets/raw_data/Breast_MRI_066/01-01-1990-NA-MRI BREAST BILATERAL WWO-36015/600.000000-ax 3d dyn-57408
datasets/raw_data/Breast_MRI_066/01-01-1990-NA-MRI BREAST BILATERAL WWO-36015/603.000000-Ph3ax 3d dyn-36478
false
ax 3d dyn
ph3/ax 3d dyn
0.856441
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_066_lattice.pt
[ 3, 64, 64, 64 ]
[ 168, 512, 512 ]
[ 79, 105, 284, 319, 106, 137 ]
469.810211
385.903992
0
2,638.37085
12,223.361328
40,789.789063
0
976,099.25
191.683517
216.419922
-366.401825
1,891.341797
2026-04-15T22:02:23
Breast_MRI_067
REVIEW
datasets/raw_data/Breast_MRI_067/01-01-1990-NA-MRI BREAST BILATERAL WWO-10597/17.000000-ax dyn 4th pass-27740
datasets/raw_data/Breast_MRI_067/01-01-1990-NA-MRI BREAST BILATERAL WWO-10597/17.000000-ax dyn 4th pass-27740
true
ax dyn 4th pass
ax dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_067_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 448, 448 ]
[ 54, 69, 151, 181, 364, 387 ]
52.03492
52.768276
0
260.719727
179.95079
430.39325
0
7,151.469727
0
0
0
0
2026-04-15T22:02:35
Breast_MRI_068
OK
datasets/raw_data/Breast_MRI_068/01-01-1990-NA-MRI BREAST BILATERAL WWO-06963/500.000000-ax 3d dyn MP-53836
datasets/raw_data/Breast_MRI_068/01-01-1990-NA-MRI BREAST BILATERAL WWO-06963/504.000000-Ph4ax 3d dyn MP-93134
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.878638
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_068_lattice.pt
[ 3, 64, 64, 64 ]
[ 186, 512, 512 ]
[ 71, 117, 287, 404, 78, 138 ]
320.225891
619.040955
0
6,953.414551
27,298.964844
82,483.84375
0
2,015,678.75
121.972717
323.145416
-1,592.36377
4,985.925781
2026-04-15T22:02:55
Breast_MRI_069
OK
datasets/raw_data/Breast_MRI_069/01-01-1990-NA-MRI BREAST BILATERAL W WO-11523/500.000000-ax dyn-08874
datasets/raw_data/Breast_MRI_069/01-01-1990-NA-MRI BREAST BILATERAL W WO-11523/504.000000-Ph4ax dyn-37259
false
ax dyn
ph4/ax dyn
0.852115
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_069_lattice.pt
[ 3, 64, 64, 64 ]
[ 196, 512, 512 ]
[ 113, 130, 308, 335, 326, 364 ]
141.248077
231.426102
0
1,481.851196
4,702.980469
16,776.886719
0
260,285.5625
43.0448
78.938347
-297.510864
745.250122
2026-04-15T22:03:16
Breast_MRI_070
OK
datasets/raw_data/Breast_MRI_070/01-01-1990-NA-MRI BREAST BILATERAL W WO-60193/500.000000-ax 3d dyn MP-68220
datasets/raw_data/Breast_MRI_070/01-01-1990-NA-MRI BREAST BILATERAL W WO-60193/504.000000-Ph4ax 3d dyn MP-02001
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.846195
[ 0, 1, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_070_lattice.pt
[ 3, 64, 64, 64 ]
[ 176, 512, 512 ]
[ 91, 108, 371, 411, 360, 395 ]
373.851501
646.550171
0
5,456.349121
38,947.636719
111,844.140625
0
1,752,173
121.101936
276.217621
-1,228.117188
4,070.628906
2026-04-15T22:09:06
Breast_MRI_071
OK
datasets/raw_data/Breast_MRI_071/01-01-1990-NA-MRI BREAST BILATERAL WWO-75351/500.000000-ax 3d dyn-75876
datasets/raw_data/Breast_MRI_071/01-01-1990-NA-MRI BREAST BILATERAL WWO-75351/603.000000-Ph3ax 3d dyn-33125
false
ax 3d dyn
ph3/ax 3d dyn
0.860547
[ 0, 1, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_071_lattice.pt
[ 3, 64, 64, 64 ]
[ 196, 512, 512 ]
[ 67, 95, 353, 402, 337, 378 ]
628.19635
479.77478
0
2,202.271973
18,125.929688
35,451.601563
0
484,041.25
79.998955
151.929214
-645.196045
1,510.373535
2026-04-15T22:09:25
Breast_MRI_072
REVIEW
datasets/raw_data/Breast_MRI_072/01-01-1990-NA-MRI BREAST BILATERAL WWO-05582/15.000000-ax dyn 4th pass-28177
datasets/raw_data/Breast_MRI_072/01-01-1990-NA-MRI BREAST BILATERAL WWO-05582/15.000000-ax dyn 4th pass-28177
true
ax dyn 4th pass
ax dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_072_lattice.pt
[ 3, 64, 64, 64 ]
[ 144, 320, 320 ]
[ 50, 64, 79, 103, 197, 227 ]
63.84206
104.439461
0
700.619141
727.119263
1,886.568115
0
38,925.039063
0
0
0
0
2026-04-15T22:09:31
Breast_MRI_073
OK
datasets/raw_data/Breast_MRI_073/01-01-1990-NA-MRI BREAST BILATERAL W WO-32234/600.000000-ax dynamic-27064
datasets/raw_data/Breast_MRI_073/01-01-1990-NA-MRI BREAST BILATERAL W WO-32234/603.000000-Ph3ax dynamic-77239
false
ax dynamic
ph3/ax dynamic
0.85124
[ 1, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_073_lattice.pt
[ 3, 64, 64, 64 ]
[ 176, 512, 512 ]
[ 108, 124, 324, 345, 122, 143 ]
444.246613
415.692413
0
2,617.808838
13,447.883789
32,939.988281
0
692,860.375
176.483826
235.462708
-575.807251
1,792.5354
2026-04-15T22:09:46
Breast_MRI_074
REVIEW
datasets/raw_data/Breast_MRI_074/01-01-1990-NA-MRI BREAST BILATERAL WWO-54749/9.000000-ax dyn 4th pass-80463
datasets/raw_data/Breast_MRI_074/01-01-1990-NA-MRI BREAST BILATERAL WWO-54749/9.000000-ax dyn 4th pass-80463
true
ax dyn 4th pass
ax dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_074_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 448, 448 ]
[ 81, 110, 122, 214, 336, 391 ]
62.665314
129.472672
0
1,116.234497
1,277.778564
3,802.022217
0
62,006.421875
-0
0
-0.000031
0.000008
2026-04-15T22:09:57
Breast_MRI_075
REVIEW
datasets/raw_data/Breast_MRI_075/01-01-1990-NA-BREASTROUTINE-04746/13.000000-ax dyn 3rd pass-76070
datasets/raw_data/Breast_MRI_075/01-01-1990-NA-BREASTROUTINE-04746/13.000000-ax dyn 3rd pass-76070
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_075_lattice.pt
[ 3, 64, 64, 64 ]
[ 208, 448, 448 ]
[ 83, 100, 126, 140, 319, 337 ]
95.277802
104.025955
0
781.426941
708.61322
1,660.222656
0
27,844.273438
0
0
0
0
2026-04-15T22:10:10
Breast_MRI_076
REVIEW
datasets/raw_data/Breast_MRI_076/01-01-1990-NA-MRI BREAST BILATERAL WWO-82613/13.000000-ax dyn 3rd pass-35427
datasets/raw_data/Breast_MRI_076/01-01-1990-NA-MRI BREAST BILATERAL WWO-82613/13.000000-ax dyn 3rd pass-35427
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_076_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 320, 320 ]
[ 52, 63, 113, 133, 87, 110 ]
75.869057
90.939362
0
358.521149
461.995056
1,211.803589
0
16,029.091797
0
0
0
0
2026-04-15T22:10:16
Breast_MRI_077
OK
datasets/raw_data/Breast_MRI_077/01-01-1990-NA-MRI BREAST BILATERAL WWO-05364/500.000000-ax 3d dyn MP-69290
datasets/raw_data/Breast_MRI_077/01-01-1990-NA-MRI BREAST BILATERAL WWO-05364/504.000000-Ph4ax 3d dyn MP-74754
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.847436
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_077_lattice.pt
[ 3, 64, 64, 64 ]
[ 174, 512, 512 ]
[ 90, 121, 257, 320, 102, 150 ]
709.310486
952.675537
0
5,632.418945
60,026.933594
129,154.328125
0
2,110,181
275.787842
596.445923
-1,086.806763
4,503.94043
2026-04-15T22:10:30
Breast_MRI_078
OK
datasets/raw_data/Breast_MRI_078/01-01-1990-NA-MRI BREAST BILATERAL WWO-54425/500.000000-ax 3d dyn-43560
datasets/raw_data/Breast_MRI_078/01-01-1990-NA-MRI BREAST BILATERAL WWO-54425/504.000000-Ph4ax 3d dyn-52953
false
ax 3d dyn
ph4/ax 3d dyn
0.847606
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_078_lattice.pt
[ 3, 64, 64, 64 ]
[ 176, 512, 512 ]
[ 48, 70, 268, 296, 96, 125 ]
369.042084
302.681213
0
2,082.52832
8,434.258789
18,505.423828
0
482,360.5625
102.911957
148.466034
-558.755737
1,377.887817
2026-04-15T22:10:46
Breast_MRI_079
OK
datasets/raw_data/Breast_MRI_079/01-01-1990-NA-MRI BREAST BILATERAL WWO-42379/600.000000-ax 3d dyn MP-55641
datasets/raw_data/Breast_MRI_079/01-01-1990-NA-MRI BREAST BILATERAL WWO-42379/604.000000-Ph4ax 3d dyn MP-68809
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.840928
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_079_lattice.pt
[ 3, 64, 64, 64 ]
[ 154, 512, 512 ]
[ 104, 129, 316, 397, 366, 424 ]
150.818451
295.639771
0
4,478.561523
6,398.931641
23,800.232422
0
430,817.375
40.951988
118.867508
-573.215271
2,974.670898
2026-04-15T22:10:59
Breast_MRI_080
REVIEW
datasets/raw_data/Breast_MRI_080/01-01-1990-NA-MRI BREAST BILATERAL WWO-55954/8.000000-ax 3d dyn 4th pass-56269
datasets/raw_data/Breast_MRI_080/01-01-1990-NA-MRI BREAST BILATERAL WWO-55954/8.000000-ax 3d dyn 4th pass-56269
true
ax 3d dyn 4th pass
ax 3d dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_080_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 512, 512 ]
[ 53, 72, 243, 311, 383, 432 ]
337.386963
730.408936
0
5,961.325195
43,884.984375
123,468.757813
0
1,652,029.75
-0
0
-0.000061
0.000061
2026-04-15T22:11:13
Breast_MRI_081
REVIEW
datasets/raw_data/Breast_MRI_081/01-01-1990-NA-BREASTROUTINE DYNAMIC-09528/13.000000-ax dyn 3rd pass-57237
datasets/raw_data/Breast_MRI_081/01-01-1990-NA-BREASTROUTINE DYNAMIC-09528/13.000000-ax dyn 3rd pass-57237
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_081_lattice.pt
[ 3, 64, 64, 64 ]
[ 176, 448, 448 ]
[ 91, 122, 122, 181, 103, 151 ]
61.331352
65.418785
0
398.714264
299.549347
630.402527
0
8,921.869141
0
0
0
0
2026-04-15T22:11:24
Breast_MRI_082
REVIEW
datasets/raw_data/Breast_MRI_082/01-01-1990-NA-BREASTROUTINE DYNAMICS-96270/11.000000-ax dyn 3rd pass-88209
datasets/raw_data/Breast_MRI_082/01-01-1990-NA-BREASTROUTINE DYNAMICS-96270/11.000000-ax dyn 3rd pass-88209
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_082_lattice.pt
[ 3, 64, 64, 64 ]
[ 176, 448, 448 ]
[ 112, 142, 164, 210, 96, 143 ]
133.064514
71.835724
0
540.735413
707.784485
1,299.238159
0.285461
31,262.402344
0
0
0
0
2026-04-15T22:11:35
Breast_MRI_083
OK
datasets/raw_data/Breast_MRI_083/01-01-1990-NA-MRI BREAST BILATERAL WWO-59775/500.000000-ax 3d dyn-95855
datasets/raw_data/Breast_MRI_083/01-01-1990-NA-MRI BREAST BILATERAL WWO-59775/504.000000-Ph4ax 3d dyn-80421
false
ax 3d dyn
ph4/ax 3d dyn
0.843229
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_083_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 512, 512 ]
[ 43, 94, 214, 368, 80, 173 ]
154.541519
312.11087
0
2,677.177979
5,117.630859
14,688.978516
0
286,260.6875
49.867111
150.261383
-659.938965
1,787.761475
2026-04-15T22:11:49
Breast_MRI_084
REVIEW
datasets/raw_data/Breast_MRI_084/01-01-1990-NA-BREASTROUTINE-59236/11.000000-ax dyn 3rd pass-26076
datasets/raw_data/Breast_MRI_084/01-01-1990-NA-BREASTROUTINE-59236/11.000000-ax dyn 3rd pass-26076
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_084_lattice.pt
[ 3, 64, 64, 64 ]
[ 208, 448, 448 ]
[ 128, 145, 170, 196, 105, 127 ]
52.258888
44.288937
0
301.271179
199.139572
464.215027
0
9,715.539063
-0
0
-0.000002
0
2026-04-15T22:12:03
Breast_MRI_085
REVIEW
datasets/raw_data/Breast_MRI_085/01-01-1990-NA-BREASTROUTINE DYNAMIC-66207/12.000000-ax dyn 3rd pass-78424
datasets/raw_data/Breast_MRI_085/01-01-1990-NA-BREASTROUTINE DYNAMIC-66207/12.000000-ax dyn 3rd pass-78424
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_085_lattice.pt
[ 3, 64, 64, 64 ]
[ 144, 448, 448 ]
[ 99, 114, 159, 187, 104, 135 ]
44.251663
49.757874
0
349.173126
168.823425
422.552826
0
9,577.511719
0
0
0
0
2026-04-15T22:12:12
Breast_MRI_086
REVIEW
datasets/raw_data/Breast_MRI_086/01-01-1990-NA-BREASTROUTINE-86704/11.000000-ax dyn 3rd pass-77551
datasets/raw_data/Breast_MRI_086/01-01-1990-NA-BREASTROUTINE-86704/11.000000-ax dyn 3rd pass-77551
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_086_lattice.pt
[ 3, 64, 64, 64 ]
[ 208, 448, 448 ]
[ 70, 144, 107, 212, 86, 152 ]
34.423809
54.313904
0
376.837372
212.223267
465.334686
0
6,789.650391
-0
0
-0.000015
0
2026-04-15T22:12:26
Breast_MRI_087
OK
datasets/raw_data/Breast_MRI_087/01-01-1990-NA-MRI BREAST BILATERAL W WO-17018/900.000000-ax 3d dyn-86082
datasets/raw_data/Breast_MRI_087/01-01-1990-NA-MRI BREAST BILATERAL W WO-17018/903.000000-Ph3ax 3d dyn-47118
false
ax 3d dyn
ph3/ax 3d dyn
0.883008
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_087_lattice.pt
[ 3, 64, 64, 64 ]
[ 156, 512, 512 ]
[ 105, 120, 359, 399, 109, 155 ]
284.180511
383.347534
0
3,535.461426
12,207.001953
34,183.003906
0
1,051,208.75
137.509781
230.12085
-500
2,633.307617
2026-04-15T22:12:40
Breast_MRI_088
OK
datasets/raw_data/Breast_MRI_088/01-01-1990-NA-MRI BREAST BILAT W-WO-RH-51466/500.000000-ax dynamic-19746
datasets/raw_data/Breast_MRI_088/01-01-1990-NA-MRI BREAST BILAT W-WO-RH-51466/504.000000-Ph4ax dynamic-90650
false
ax dynamic
ph4/ax dynamic
0.863413
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_088_lattice.pt
[ 3, 64, 64, 64 ]
[ 180, 512, 512 ]
[ 70, 81, 284, 309, 436, 459 ]
403.030365
642.036072
0
2,383.40918
19,601.394531
59,654.78125
0
747,396.125
145.019791
263.313324
-293
1,323.999878
2026-04-15T22:12:57
Breast_MRI_089
OK
datasets/raw_data/Breast_MRI_089/01-01-1990-NA-MRI BREAST BILATERAL W WO-52386/500.000000-ax dynamic-51376
datasets/raw_data/Breast_MRI_089/01-01-1990-NA-MRI BREAST BILATERAL W WO-52386/503.000000-Ph3ax dynamic-39888
false
ax dynamic
ph3/ax dynamic
0.867923
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_089_lattice.pt
[ 3, 64, 64, 64 ]
[ 176, 512, 512 ]
[ 129, 160, 230, 348, 390, 447 ]
56.402386
168.288193
0
4,824.109863
2,305.107422
10,061.875977
0
269,925.3125
14.495136
79.699379
-478.259308
3,510.55957
2026-04-15T22:13:14
Breast_MRI_090
OK
datasets/raw_data/Breast_MRI_090/01-01-1990-NA-MRI BREAST BILATERAL WWO-86124/500.000000-ax 3d dyn-49363
datasets/raw_data/Breast_MRI_090/01-01-1990-NA-MRI BREAST BILATERAL WWO-86124/503.000000-Ph3ax 3d dyn-33158
false
ax 3d dyn
ph3/ax 3d dyn
0.890417
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_090_lattice.pt
[ 3, 64, 64, 64 ]
[ 196, 512, 512 ]
[ 45, 164, 273, 391, 305, 430 ]
493.78186
1,035.67749
0
6,371.357422
58,786.835938
165,687.65625
0
2,273,592
247.647278
614.132507
-910.891846
4,707.749023
2026-04-15T22:13:34
Breast_MRI_091
REVIEW
datasets/raw_data/Breast_MRI_091/01-01-1990-NA-MRI BREAST BILATERAL WWO-35745/19.000000-ax dyn 4th pass-43351
datasets/raw_data/Breast_MRI_091/01-01-1990-NA-MRI BREAST BILATERAL WWO-35745/19.000000-ax dyn 4th pass-43351
true
ax dyn 4th pass
ax dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_091_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 448, 448 ]
[ 72, 118, 155, 233, 288, 374 ]
31.525383
31.618715
0
316.995514
82.221031
221.583649
0
5,648.907227
0
0
0
0
2026-04-15T22:13:45
Breast_MRI_092
REVIEW
datasets/raw_data/Breast_MRI_092/01-01-1990-NA-MRI BREAST BILATERAL WWO-76323/15.000000-ax dyn 4th pass-23704
datasets/raw_data/Breast_MRI_092/01-01-1990-NA-MRI BREAST BILATERAL WWO-76323/15.000000-ax dyn 4th pass-23704
true
ax dyn 4th pass
ax dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_092_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 320, 320 ]
[ 119, 131, 100, 125, 238, 256 ]
20.340565
52.999172
0
343.831757
187.097412
739.38324
0
13,331.060547
-0
0
-0.000004
0
2026-04-15T22:13:50
Breast_MRI_093
OK
datasets/raw_data/Breast_MRI_093/01-01-1990-NA-MRI BREAST BILATERAL WWO-59443/600.000000-ax 3d dyn MP-34030
datasets/raw_data/Breast_MRI_093/01-01-1990-NA-MRI BREAST BILATERAL WWO-59443/604.000000-Ph4ax 3d dyn MP-68157
false
ax 3d dyn mp
ph4/ax 3d dyn mp
0.899368
[ 0, 1, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_093_lattice.pt
[ 3, 64, 64, 64 ]
[ 150, 512, 512 ]
[ 90, 102, 395, 415, 140, 159 ]
535.252319
973.110657
0
4,663.411133
46,623.988281
161,368.203125
0
2,503,080
95.440498
304.577942
-1,270.109375
2,263.030762
2026-04-15T22:14:03
Breast_MRI_094
REVIEW
datasets/raw_data/Breast_MRI_094/01-01-1990-NA-BREASTROUTINE DYNAMICS-81023/13.000000-ax dyn 3rd pass-67042
datasets/raw_data/Breast_MRI_094/01-01-1990-NA-BREASTROUTINE DYNAMICS-81023/13.000000-ax dyn 3rd pass-67042
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_094_lattice.pt
[ 3, 64, 64, 64 ]
[ 176, 448, 448 ]
[ 69, 111, 41, 107, 60, 114 ]
65.646126
93.318268
0
998.722778
691.727173
2,317.359375
0
59,022.921875
-0
0
-0.000002
0
2026-04-15T22:14:14
Breast_MRI_095
REVIEW
datasets/raw_data/Breast_MRI_095/01-01-1990-NA-BREASTROUTINE DYNAMICS-26681/11.000000-ax dyn 3rd pass-66603
datasets/raw_data/Breast_MRI_095/01-01-1990-NA-BREASTROUTINE DYNAMICS-26681/11.000000-ax dyn 3rd pass-66603
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_095_lattice.pt
[ 3, 64, 64, 64 ]
[ 176, 448, 448 ]
[ 54, 64, 211, 232, 381, 405 ]
54.016701
43.94347
0
288.3125
141.650055
338.820068
0
6,776.73291
0
0
0
0
2026-04-15T22:14:24
Breast_MRI_096
REVIEW
datasets/raw_data/Breast_MRI_096/01-01-1990-NA-MRI BREAST BILATERAL WWO-05088/15.000000-ax dyn 4th pass-56498
datasets/raw_data/Breast_MRI_096/01-01-1990-NA-MRI BREAST BILATERAL WWO-05088/15.000000-ax dyn 4th pass-56498
true
ax dyn 4th pass
ax dyn 4th pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_096_lattice.pt
[ 3, 64, 64, 64 ]
[ 160, 448, 448 ]
[ 31, 68, 207, 240, 121, 202 ]
59.602066
110.302773
0
742.291626
676.699829
1,947.420288
0
29,205.167969
-0
0
-0
0
2026-04-15T22:14:34
Breast_MRI_097
REVIEW
datasets/raw_data/Breast_MRI_097/01-01-1990-NA-BREASTROUTINE-94579/11.000000-ax dyn 3rd pass-97826
datasets/raw_data/Breast_MRI_097/01-01-1990-NA-BREASTROUTINE-94579/11.000000-ax dyn 3rd pass-97826
true
ax dyn 3rd pass
ax dyn 3rd pass
1
[ 0, 0, 0 ]
true
/Users/marjorie/Documents/GitHub/microCube/datasets/micro_cubes/Breast_MRI_097_lattice.pt
[ 3, 64, 64, 64 ]
[ 208, 448, 448 ]
[ 105, 144, 150, 205, 97, 158 ]
83.890694
91.322754
0
717.466309
807.493652
1,929.473755
0
31,761.367188
-0
0
-0
0
2026-04-15T22:14:46
End of preview.

microCube (Bio-Lattice) Tensors: Duke Breast Cancer MRI

This repository contains precomputed microCube / Bio-Lattice tensors derived from the Duke Breast Cancer MRI cohort. The goal is to provide compact, training-ready MRI representations without requiring downstream users to download or process the original DICOM volumes.

These files are intended for research and method-development use only. They are not intended for clinical diagnosis or treatment decisions.

Repository Structure

  • micro_cubos/: PyTorch .pt microCube tensors.
  • extraction_audits/: JSONL extraction audit logs used to determine whether each patient is suitable for training.
  • Each tensor follows the naming convention {PatientID}_lattice.pt.

The current project snapshot contains:

  • 922 patient microCube tensors.
  • Latest audit status summary: 876 OK, 13 WARNING, 33 REVIEW.
  • Training-eligible policy used by the reference pipeline: OK + WARNING = 889 patients.

REVIEW cases are kept in the dataset for transparency and future method development, but the reference training pipeline excludes them through the extraction audit filter.

Source Data and Attribution

This dataset is a processed derivative of the Duke Breast Cancer MRI cohort, originally hosted on The Cancer Imaging Archive (TCIA).

  • Original dataset: Breast-Cancer-MRI-minus-DICOM
  • Original citation: Saha, A., Harowicz, M. R., Grimm, L. J., Kim, C. E., Mazurowski, M. A. (2018). A machine learning approach to radiogenomics of breast cancer: a study of 922 patients and a comparison with 110 gene signatures. JCO Precision Oncology.

Please cite the original TCIA/Duke dataset and this processed representation dataset when using these tensors.

Processing Summary

The conversion from raw DICOM to compact tensors was performed with the microCube / Bio-Lattice pipeline. The pipeline selects PRE/POST DCE-MRI series, registers the selected volumes, crops around the lesion ROI, and resamples the representation into a fixed-size 3D tensor.

Current tensor specification:

  • Shape: [4, 64, 64, 64] as (C, D, H, W).
  • Format: PyTorch .pt.
  • Each .pt file stores at least a tensor entry and metadata used by the reference pipeline.

Channels:

  • C1: post-contrast anatomical signal.
  • C2: local heterogeneity / variance.
  • C3: enhancement kinetics.
  • C4: focal peak / vascularity-oriented signal.

Extraction Audits

The extraction_audits/ folder contains JSONL audit records generated during data extraction. The reference training code resolves the latest status per patient and trains only on statuses configured as eligible:

TRAIN_FILTER_BY_AUDIT = True
TRAIN_ALLOWED_AUDIT_STATUSES = ("OK", "WARNING")

The REVIEW status is used for cases with higher technical risk, such as high compression risk, low registration correlation, high PRE zero fraction, or missing required series. These cases are retained to support future robustness work, but they should not be mixed into baseline training unless intentionally studied.

Usage With the GitHub Pipeline

The tensors are designed to be used with the microCube GitHub repository:

git clone https://github.com/msancheza/biolattice.git
cd biolattice

Expected local layout after downloading this dataset:

datasets/micro_cubes/
dashboard/extraction_audits/
datasets/Clinical_and_Other_Features.xlsx

The clinical spreadsheet is maintained in the GitHub repository. The Hugging Face dataset provides the derived tensors and extraction audits.

Quick Load Example

import torch

path = "micro_cubos/Breast_MRI_001_lattice.pt"
obj = torch.load(path, map_location="cpu", weights_only=True)

cube = obj["tensor"] if isinstance(obj, dict) else obj
print(cube.shape)  # expected: torch.Size([4, 64, 64, 64])

Training Notes

The current reference training flow uses:

  • Audit-based filtering of OK and WARNING patients.
  • Patient-level stratified train/validation split.
  • A 3D ResNet-style classifier over the 4-channel microCube plus metadata features.
  • Optional experiment tracking with Weights & Biases.

The project is actively evaluating input normalization policies. Recent experiments compare training with and without an additional per-channel Z-score normalization at model input time. Check the GitHub repository configuration and training logs for the exact preprocessing policy used in a given run.

Limitations

  • These tensors are derived representations, not raw DICOM studies.
  • Fixed-size ROI resampling may compress very large lesions or surrounding tissue context.
  • REVIEW cases require manual or methodological follow-up before baseline training use.
  • Metrics should be interpreted as research benchmarks, not clinical performance claims.
  • Downstream results depend on audit filtering, preprocessing policy, split seed, and model configuration.
Downloads last month
4,047