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2025-04-16T17:07:04
DS_in2572v33lon_0
1
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2025-04-16T21:13:01
DS_in2572v33lon_0
1
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DFT-RPBE-D3
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2025-04-16T17:08:25
DS_in2572v33lon_0
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2025-04-16T16:46:19
DS_in2572v33lon_0
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2025-04-16T18:53:17
DS_in2572v33lon_0
1
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2025-04-16T15:42:27
DS_in2572v33lon_0
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9215560908081874558955183999755298983293361764175162974328617677071695658643045501862903555553471880600454276462119649227696998256554720374685839828647112
11935593375084861166216382684669824151273439467940282083090476527178798139750136093735684669403934321334648697602209581793216676792029754619127750106031868
[ [ 14.782194, 0, 0 ], [ 0, 14.782194, 0 ], [ 0, 0, 14.782194 ] ]
[ [ 13.590896808, 11.364940275, 7.568700076 ], [ 15.237833466, 10.72608031, 6.74829027 ], [ 12.061863989, 10.180982923, 7.405032721 ], [ 7.222589039, 5.36096429, 14.56362049 ], [ 5.477666263, 4.667700977, 15.013853588 ], [ 7.052250948...
[ true, true, true ]
H32O16
H2O
A2B
[ "H", "O" ]
[ 0.6666666666666666, 0.3333333333333333 ]
[ 8, 1, 1, 8, 1, 1, 8, 1, 1, 8, 1, 1, 8, 1, 1, 8, 1, 1, 8, 1, 1, 8, 1, 1, 8, 1, 1, 8, 1, 1, 8, 1, 1, 8, 1, 1, 8, 1, 1, 8, 1, 1, 8, 1, 1, 8, 1, 1 ]
48
2
0
[ 0, 0, 0 ]
[ "input.data.BLYP-D3", "input.data.RPBE", "input.data.RPBE-D3", "input.data.BLYP" ]
null
data/MD/5202/MD_1086845055867124744315202.json
data/MD/7813/MD_9950930341703758760497813.json
null
{"atomic-charges": [-0.23242575, 0.11556841, 0.13640115, -0.23205286, 0.10445784, 0.12087775, -0.23499997, 0.11569854, 0.10202352, -0.22213873, 0.12535545, 0.12212576, -0.23939895, 0.11419503, 0.13653988, -0.25134499, 0.10591014, 0.10666051, -0.2067593, 0.12074045, 0.13863736, -0.29067318, 0.09835178, 0.09297981, -0.24207876, 0.13001115, 0.12520973, -0.22754003, 0.11597814, 0.13785495, -0.24043959, 0.10753609, 0.10627809, -0.20152126, 0.11786615, 0.15723932, -0.25393144, 0.10086091, 0.13010335, -0.23794445, 0.12220262, 0.13347092, -0.1904403, 0.11776705, 0.14468613, -0.28964969, 0.10308662, 0.08665956], "charge": 0.0, "hash": "9950930341703758760497813202906707703488641729853878319661578734778080123824043636150260712335865593843667811744490248465654521784519731680610226843812220", "id": "MD_9950930341703758760497813"}
{"hash": "10868450558671247443152026947160338505683745266658651051718065983487878962987857602829315249215796444208488632888003673539585986066311769564391053988452926", "id": "MD_1086845055867124744315202"}
End of preview. Expand in Data Studio

Cite this dataset Morawietz, T., and Behler, J. HDNNP H2O. ColabFit, 2023. https://doi.org/10.60732/4f9f05e5

This dataset has been curated and formatted for the ColabFit Exchange

This dataset is also available on the ColabFit Exchange:

https://materials.colabfit.org/id/DS_in2572v33lon_0

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Dataset Name

HDNNP H2O

Description

Approximately 28,000 configurations split into 4 datasets, each using a different functional, used in the training of a high-dimensional neural network potential (HDNNP).

Dataset authors

Tobias Morawietz, Jörg Behler

Publication

https://doi.org/10.1073/pnas.1602375113

Original data link

https://doi.org/10.5281/zenodo.2634097

License

CC-BY-4.0

Number of unique molecular configurations

14537

Number of atoms

1523796

Elements included

H, O

Properties included

energy, atomic forces


Usage

  • ds.parquet : Aggregated dataset information.
  • co/ directory: Configuration rows each include a structure, calculated properties, and metadata.
  • cs/ directory : Configuration sets are subsets of configurations grouped by some common characteristic. If cs/ does not exist, no configurations sets have been defined for this dataset.
  • cs_co_map/ directory : The mapping of configurations to configuration sets (if defined).

ColabFit Exchange documentation includes descriptions of content and example code for parsing parquet files:

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