1. Introduction

2. Related Work

3. A Clinical Perspective

4. Preliminaries
4.1. Datasets
4.2. Evaluation Metrics
4.2.1. Discussion
4.3. Neural Network Architectures

5. Context and Attention-based Methods for Dense Prediction Tasks
5.1. Building Blocks: Computer Vision in General
5.2. Methods for Dense Prediction Tasks in Medical Imaging

6. Cell Nuclei Instance Segmentation and Classification in Brightfield Microscopy with H&E Staining
6.1. Prior Knowledge
6.2. Local Context
6.3. Long-range Context
6.4. Global Context
6.5. Multiscale Context
6.6. Discussion
6.7. Future Research Directions

7. Colon Nuclei Instance Segmentation and Classification: A Multi-centre Comparative Study
7.1. Datasets
7.2. Methods
7.3. Results
7.4. Discussion

8. Conclusion
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